Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836340.1_cds_XP_016506297.1_19536
CDS Infomation

[gene=LOC107824087] [db_xref=GeneID:107824087] [protein=pre-mRNA-splicing factor SLU7-like] [protein_id=XP_016506297.1] [location=complement(join(30938..31015,31100..31168,31503..31606,33369..33585,35163..35462,35552..35687,35886..36299,36726..36838,36934..37097,38112..38127))] [gbkey=CDS]
Sequence

ATGGCTACTGCTTCAGTGGCTTTCAAGTCTAGAGAGGACCATAGGAAACAGTTGGAATTG
GAAGAGGCGCGAAAGGCTGGTCTTGCACCGGCAGAAGTGGATGAGGATGGAAAAGAAATC
AATCCTCACATTCCTCAGTATATGTCTTCAGCTCCTTGGTATCTCAATGCAGAGAGACCG
AGTTTGAAACATCAAAGGAAATGGAAATCCGACCCCAATTACACGAAATCATGGTATGAT
AGAGGTGCGAAAATATATCAGGCAGAAAAGTACAGAAAGGGTGCATGCGAAAACTGTGGA
GCAATGACCCATGATGCTAAGTCATGCATGGATAGGCCCCGCAAATTAGGAGCAAAATGG
ACGGGAAAGAATATTGCTCCTGATGAGAAGATAGAACAGTTTGAGCTGGATTATGATGGT
AAAAGGGACCGTTGGAATGGTTATGATGCTGCTTCCTATGCCCATATCATTGAACGATAT
GAAGCAAGGGATGAAGCAAGAAAGAAATATCTGAAAGATCAACAACTAAAAAAGTTGGAG
GAGAAAAATAACAAAGAGGATGAAGAAAGAGGCGATAGCGAAGATGAAGATTTTGAAGAT
GCTTTGAAGGTAGATGAAGCCAAGGTTGATGAAAGCAAGCAGATGGATTTTGCAAAAGTT
GAGAAGCGTGTACGAACCACTGGTGGTGGAAGCACAGGGACTGTTAGGAATCTACGTATC
CGGGAAGATACAGCAAAATATCTTCTTAATCTTGATGTCAATTCTGCACATTATGATCCC
AAGACCCGGTCCATGCGTGAAGATCCTCTTCCTGATATGGATCCAAATGAAAAATTTTAT
GCTGGAGATAACCAAAATAGAGTTAGTGGTCAAGCATTGGAGTTCAAACAGCTGAATATT
CACGCATGGGAAGCTTTTGATAAGGGTCATGATGTGCATATGCAAGCAGCTCCATCCCAA
GCAGAACTGCTTTACAAAAATTACAAGGTTAACAAGGAGAAACTGAAGTCACAAACAAAG
GAGGATATCATGGAGAAGTATGGTAATGCTGCTAGTGAAGAAATACTCCCAAGAGAACTA
CTGTTGGGTCAGAGTGAGAGAGAAGTTGAATATGATTGTGCTGGTAGGATTGTGAAGGGC
CAGGAGATGTCTCTCCCTAGGAGCAAATATGAAGAGGATGTTTACATTAATAACCACACC
ACAGTTTGGGGTTCATGGTGGAAGGACCACCAGTGGGGTTACAGGTGCTGCAAACAAACG
ATCAGAAACAGCTATTGCACAGGTGCTGCCGGAATTGAAGCAGCTGAAGCTTCTGCTGAT
CTTATGAAGGCCAATATTGCTCGCAAAGAGTCGGCTGAAGACACACATGCGCCGGTTGAG
GAGAGGAGGCTCGCTACTTGGGGTACTGAAGTACCTGACGATTTGGTTTTGGACGAGCAA
AAGCTGGCTGAAGCACTTAAAAAGGAGGATGAAAAGAGAAGAGAAGAGAGGGATGAAAGG
AAAAGGAAATATAATGTGAAGTACAATGACGAGGTTACACCGGAAGAAATGGAAGCCTAT
AGGATGAAAAAGGTCCTCCATGATGATCCAATGAGGGACTTCCTGCATTGA

Peptide Sequence

PEP ID

XP_016506297.1
PEP Infomation

PREDICTED: pre-mRNA-splicing factor SLU7-like [Nicotiana tabacum]
Sequence

MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIYQAEKYRKGACENCGAMTHDAKSCMDRPRKLGAKW
TGKNIAPDEKIEQFELDYDGKRDRWNGYDAASYAHIIERYEARDEARKKYLKDQQLKKLE
EKNNKEDEERGDSEDEDFEDALKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDMDPNEKFYAGDNQNRVSGQALEFKQLNI
HAWEAFDKGHDVHMQAAPSQAELLYKNYKVNKEKLKSQTKEDIMEKYGNAASEEILPREL
LLGQSEREVEYDCAGRIVKGQEMSLPRSKYEEDVYINNHTTVWGSWWKDHQWGYRCCKQT
IRNSYCTGAAGIEAAEASADLMKANIARKESAEDTHAPVEERRLATWGTEVPDDLVLDEQ
KLAEALKKEDEKRREERDERKRKYNVKYNDEVTPEEMEAYRMKKVLHDDPMRDFLH

Transcript Sequence

Gene sequence data has not been registered.